AFB, Acid fast bacilli – Eye/Ear

Detection of acid fast bacilli in eye and ear specimens
Microbiology
Bacteriology
○ Corneal scrapings ○ Conjunctival swab (see Notes) ○ Eye swab (see Notes) ○ Intraocular fluids (e.g. aqueous, vitreous) ○ Lacrimal stone/secretions ○ External ear swab (see Notes) ○ Tympanocentesis fluid (middle ear infections only) ○ Ear ○ Eye devices

Other Information

○ Swabs are not recommended for the isolation of mycobacteria since they provide limited material and the bacteria adsorb onto the swab material which may contain toxic substances. Negative results obtained from specimens submitted on swabs are not reliable
○ Ensure specimen is labelled as Tympanocentesis fluid rather than “ear”

○ Corneal scrapes: MGIT tube, 2 LJ agar slants, microscope slide (contact the microbiology laboratory to obtain collection supplies
○ Lacrimal stone/secretions or tympanocentesis fluid/devices: Clean, sterile container
○ Swabs: Sterile swab in Amies transport medium (eSwab) (see below)
○ Swabs are not recommended for the isolation of mycobacteria since they provide limited material and the bacteria adsorb onto the swab material which may contain toxic substances. Negative results obtained from specimens submitted on swabs are not reliable
○ Ensure specimen is labelled as Tympanocentesis fluid rather than “ear”



Corneal Scrapes:
○ For corneal scrapes, corneal surfaces should be rinsed thoroughly with sterile normal saline to remove anaesthetic prior to collecting specimen; use a Kimura scalpel to scrape across the ulcer using short firm strokes in one direction; obtain 3 to 5 scrapings per cornea. Avoid contact with eyelids/eyelashes. Inoculate scrapings into MGIT tube, agar slants, and onto microscope slide and place slide into slide holder.
Conjunctival/eye swab:
○ Conjunctival surfaces should be rinsed thoroughly with normal saline to remove anaesthetic prior to collecting specimen. Roll a sterile pre-moistened swab over the conjunctiva and place in transport medium
○ Collect samples from both affected and unaffected eyes to compare microbial growth using different swabs/transport media for each eye
Intraocular fluids:
○ Collect an aspirate of vitreous fluid or paracentesis of anterior chamber using a needle aspiration technique. Dispense fluid into sterile container.
Lacrimal stone/secretions:
○ For lacrimal stones, collect stones using sterile technique and place into sterile container.
○ For lacrimal secretions, collect visible purulent discharge using a swab or press lacrimal sac to remove exudate for culture. Do not perform a needle aspiration of the lacrimal gland.
External ear swab:
○ Insert clean, sterile swab into ear canal until resistance is met. Rotate swab to collect fluid on swab and place in transport medium.
○ If ear drum is ruptured, collect exudate on swab after inserting through an auditory speculum
Tympanocentesis fluid
○ Clean external ear canal with mild detergent. Use a syringe to aspirate fluid from the eardrum. Dispense fluid into a sterile container and transport to laboratory.
○ If anaerobic culture required, dispense some of the aspirated fluid into an anaerobic transport medium
Devices:
○ Collect device and place in sterile container using aseptic technique where possible to avoid contamination


Refer to section Sample Processing / Delivery

PHOL

○ Culture: Up to 49 days

416-586-4800 extension 4436


NO

○ Label specimen container. Place specimens in biohazard bag and seal.

○ Specimens should be stored at refrigeration (2-8˚C) after collection. Transport to the UHN/SH Microbiology Laboratory ASAP after collection

○ The specimen will be referred to the Public Health Ontario Laboratory for testing