Bacteria - Culture & Sensitivities – Respiratory (Lower)

Culture-based detection of bacterial pathogens in the lower respiratory tract
Microbiology
Bacteriology
○ BAL ○ Bronchial washings/brush specimens ○ Lung aspirates (e.g. pleural fluid) ○ Tissue/biopsy (e.g. open lung, transbronchial lung) ○ Sputum

○ Sterile container (with small amount of normal saline for tissues)

BAL
○ Pass bronchoscope transnasally or transorally (if patient is not intubated) or via endotracheal tube (if patient is intubated). Instill a large volume of 0.85% sterile saline (nonbacteriostatic) into the airway lumen. Discard the initial fluid recovered (likely contaminated). Collect the remaining fluid in a clean, sterile container via suction.

Bronchial washing/brush specimens
○ Pass bronchoscope transnasally or transorally (if patient is not intubated) or via endotracheal tube (if patient is intubated). For washings, inject aliquots of approximately 20 to 30 mL of 0.85% sterile saline (nonbacteriostatic) for adults or 5 mL for children. Suction washings into a sterile container.
○ For brushings, instill brush to collect cellular material from bronchial epithelial wall. Place protected brush sample in sterile container with 1 mL of saline.

Lung aspirates (e.g. pleural fluid)
○ Samples should be collected aseptically through decontaminated skin using a syringe and needle and placed in a sterile container.
○ Decontaminate skin. Insert needle into pleural space, aspirate fluid into syringe OR collect pleural fluid directly from drain if chest tube has been inserted to drain pleural space. Transfer specimen into sterile (at least 1 mL), leakproof container.

Tissue (Respiratory tract)
○ Collect 5-10 mm3 tissue aseptically using surgical technique/punch biopsy. Place in a clean, sterile container with a small amount of sterile saline.

Sputum/tracheal aspirate
○ Collect sputum by expectoration, induction or by tracheal aspiration in sterile container.
○ For endotracheal aspirates, collect aspirated material using a NEW sterile catheter or in-line catheter and aspirate material from the trachea using a syringe or suction device


Refer to section Sample Processing / Delivery

In-house

○ up to 72 h

416-586-4800 extension 4449

NO

○ Label specimen container. Place specimens in biohazard bag and seal.

○ Specimens can be held at room temperature (20-25˚C) after collection and transported to the UHN/SH Microbiology Laboratory ASAP after collection. Specimens should be stored at refrigeration temperature (2-8C˚) after collection if a delay of more than 2h is anticipated.